Software
Structure comparison and analysis
Voronota: a fast and reliable tool for computing the vertices of the Voronoi diagram of atomic balls
VoroMQA: assessment of protein structure quality using interatomic contact areas
PPI3D: search, analyze and model protein-protein interactions in the context of 3D structures
Sequence search and analysis
PDEXK server for detection of new protein families from the PDEXK superfamily
COMA: a method for detection of distant evolutionary relationships
Re-searcher: a system for recurrent searches of homologs in protein sequence databases
The PSI-BLAST Intermediate Sequence Search tool: PSI-BLAST-ISS
Other